A hydrogen atom is only about a ten millionth of a millimeter in diameter, but the proton in the middle is a hundred thousand times smaller, and the electron whizzing around the outside is a thousand times smaller than THAT. The rest of the atom is empty. I tried to picture it, and I couldn't. So I put together this page - and I still can't picture it.
The electron in this model is only one pixel. You’ll have to scroll to the right to see it. Link -via Dump Trumpet